News|Articles|October 8, 2025

How Is Explainable AI Transforming Spectroscopy?

Listen
0:00 / 0:00

Key Takeaways

  • Explainable AI (XAI) enhances transparency in AI models, crucial for trust in spectroscopy applications.
  • Techniques like SHAP, LIME, and CAM provide insights into AI decision-making without altering models.
SHOW MORE

A recent review by Jhonatan Contreras and Thomas Bocklitz from Friedrich Schiller University Jena and the Leibniz Institute of Photonic Technology delves into the emerging field of explainable artificial intelligence (XAI) in spectroscopy.

Introduction

Spectroscopy, encompassing techniques like Raman and infrared spectroscopy, plays a pivotal role in medical diagnostics, environmental monitoring, and chemical analysis. Traditionally, interpreting spectral data has been a complex task, often requiring expert knowledge. The integration of artificial intelligence (AI) has revolutionized this field, automating data analysis and pattern recognition. However, the "black-box" nature of many AI models has raised concerns regarding transparency and trustworthiness, especially in critical applications. This is where explainable artificial intelligence (XAI) comes into play.

The Rise of Explainable AI in Spectroscopy

In their systematic review published in Pflügers Archiv-European Journal of Physiology, Contreras and Bocklitz examined 21 studies that applied XAI techniques to spectroscopy data. Their findings underscore a shift toward methods that not only provide accurate predictions but also offer insights into the decision-making processes of AI models. This transparency is crucial for gaining the trust of clinicians and researchers who rely on these analyses for decision-making.

Popular XAI Techniques in Spectral Analysis

The review identifies several XAI methods that have been effectively utilized in spectroscopy:

  • SHapley Additive exPlanations (SHAP): A model-agnostic approach that assigns each feature an importance value, helping to understand the contribution of each spectral band to the model's prediction.
  • Local Interpretable Model-agnostic Explanations (LIME): Focuses on interpreting individual predictions by approximating the model locally with an interpretable surrogate model.
  • Class Activation Mapping (CAM): Originally developed for image data, CAM has been adapted to highlight important spectral regions influencing the model's decision.

These techniques are favored for their ability to provide insights without necessitating modifications to the underlying AI models.

Emphasis on Spectral Bands Over Intensity Peaks

A notable observation from the reviewed studies is the emphasis on identifying significant spectral bands rather than focusing solely on specific intensity peaks. This approach aligns with the chemical and physical characteristics of the substances being analyzed, leading to more consistent and reliable interpretations. By prioritizing spectral bands, researchers can achieve a more holistic understanding of the data, which is essential for accurate diagnostics and analysis.

Challenges and Future Directions

Despite the promising developments, the integration of XAI into spectroscopy faces several challenges:

  • Data Complexity: Spectral data is often high-dimensional, making it challenging to interpret using traditional XAI methods.
  • Model Adaptation: Many XAI techniques are borrowed from other domains, such as image analysis, and may require adaptation to suit the unique characteristics of spectral data.
  • Standardization: There is a lack of standardized protocols for applying XAI in spectroscopy, which can lead to inconsistencies in results and interpretations.

Looking forward, the authors advocate for the development of new XAI methods tailored specifically for spectroscopy. Such advancements would enhance the interpretability of AI models, fostering greater confidence among users and facilitating broader adoption in various applications.

Conclusion

The integration of XAI into spectroscopy represents a significant step toward more transparent and reliable analytical methods. By elucidating the decision-making processes of AI models, XAI enhances trust and facilitates the adoption of these technologies in critical fields. As research in this area progresses, it holds the potential to transform how spectral data is analyzed and interpreted, paving the way for more informed and accurate decision-making across various domains.

References

(1) Contreras, J.; Bocklitz, T. Explainable Artificial Intelligence for Spectroscopy Data: A Review. Pflügers Arch. Eur. J. Physiol. 2025, 477, 603–615. DOI: 10.1007/s00424-024-02997-y

(2) Ahmed, M. T.; et al. A Systematic Review of Explainable Artificial Intelligence for Spectroscopy. Comput. Electron. Agric. 2025, 110354. DOI: 10.1016/j.compag.2025.110354

(3) Chen, W.; et al. Explainable Two-Layer Mode Machine Learning Method for Spectral Data Analysis. Appl. Sci. 2025, 15 (11), 5859. DOI: 10.3390/app15115859

(4) Ghosh, T.; et al. Application-Oriented Understanding of Spectroelectrochemistry. ACS Electrochem. 2025, 5 (2), 215–225. DOI: 10.1021/acselectrochem.5c00215


Related to this article

Human body wireframe on glowing platform undergoing futuristic body scan. © sergray(noAIelemens) -chronicles-stock.adobe.com
Jurgen Popp, Thomas Mayerhofer, and colleagues at Leibniz IPHT and Friedrich Schiller University Jena introduce the Personalized Optical Digital Twin (PODT), a Photonics21 contribution to Europe's Virtual Human Twin ecosystem that connects molecular photonics—Raman blood analysis, coherent Raman tissue imaging, and multimodal endomicroscopy—with longitudinal physiology and clinical data. Drawing on the published multicenter INTELLIGENCE trials, the authors argue that technical feasibility and clinical utility must be evaluated separately as the field moves toward Europe's FP10 research agenda.
The Society for Applied Spectroscopy Logo 2026
The Peter Griffiths Award, named for the legendary infrared spectroscopist, recognizes the best paper published annually in Applied Spectroscopy Practica. Its inaugural recipients, Sara Fraser-Miller and coauthors, will be honored at SciX 2026, and the journal is now accepting 2026 submissions for the third award.
Artist’s conception of a futuristic laser-based instrument ©  MD AL AMIN-chronicles-stock.adobe.com
Raman spectroscopy is shedding its bulky, benchtop reputation as chip-scale spectrometers, tip-enhanced probes, and AI-native detectors push the technique into pockets, production lines, and single molecules. The result is an instrument category being rebuilt from the optics up, faster, smaller, deeper, and smarter than the Raman systems of even five years ago.
Car wrapping specialist putting vinyl foil or film on car. Selective focus. | Image Credit: © hedgehog94 - stock.adobe.com
Researchers have developed a new validated attenuated total reflectance Fourier transform infrared (ATR-FTIR) and Raman spectroscopy framework for forensically distinguishing automotive vinyl wraps by manufacturer, color, and finish.